Your fingers are the best comb.... -G Ray
This is an ongoing stream of exclusively textual posts (more information at streams.gerstein.info)
Here's a letter to the Times that wasn't published:
I was very intrigued by your recent column about a proposed tunnel
connecting Long Island to Westchester. As the piece noted, this
tunnel follows a route long ago advocated by Robert Moses. If such a
tunnel were ever to be built, it would validate one of Moses' original
designs for the road network encircling New York City; thus, in a way,
this proposal revitalizes his original dream. However, it is worth
pointing out that Moses' original plan was for a bridge, not a tunnel.
Moses, in fact, strongly disliked and actively opposed tunnels,
whereas he felt bridges made a stronger and grander statement. Thus,
the interesting twist in the column is how it simultaneously revives
Moses' original dream just as it implicitly criticizes his
stubbornness.
-- 24.12.07 Labels: L2E, UnpublishedLetter
Cycling from Bethesda into DC and back
Route taken on Google Maps
Summary: ~40 miles cycling
Geotagged images, served from [P]icassa or [F]lickr (also look at overall flickr map)
-- 3.12.07 Labels: routes-timings
The ENCODE paper coined the term RFBR for "hits" in chIP-chip experiments, viz: "We refer to regions with enriched binding of regulatory factors as RFBRs. RFBRs were identified on the basis of ChIP-chip data in two ways..." Some other terms were considered instead of RFBR. Here's a list of some of them:
CHIRP -- chip hit of regulatory potential
EIGR -- experimentally identified genomic region (like mountain)
GRAF -- Genomic region associated with function
GRAB -- Genomic region associated with binding
MONOD
RELIC -- Regulatory element in living cells
GELC -- Genomic element in living cells
FELC -- Functional event in living cells
MOJO
EDGE -- Experimentally determined genomic element
GEMMS -- Genomic element defined by multple methods
LORE
REIVE -- Regulatory element in vivo
GERP -- Genomic element of regulatory potential
TRE -- transcriptional regulatory element
GIVE -- Genomic in-vivo element
LRE -- long-range element
RFBS -- regulatory factor binding site